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SRX25617294: Nanopore sequencing of clinical CRE isolates: human
1 OXFORD_NANOPORE (MinION) run: 40,000 spots, 327.5M bases, 273.6Mb downloads

Design: Nanopore WGS of bacterial isolates
Submitted by: Columbia University Medical Center
Study: Carbapenem-resistant Enterobacterales from a New York City Hospital sequencing data
PRJNA1133668 • SRP518730 • All experiments • All runs
show Abstracthide Abstract
This is a longitudinal collection of CRE isolates collected at a New York City hospital over a 10 year time period to determine their population structure and mechanisms of resistance and transmission.
Sample:
SAMN40518048 • SRS21937362 • All experiments • All runs
Organism: Klebsiella variicola
Library:
Name: NR5804_Nanopore
Instrument: MinION
Strategy: WGS
Source: GENOMIC
Selection: RANDOM
Layout: SINGLE
Runs: 1 run, 40,000 spots, 327.5M bases, 273.6Mb
Run# of Spots# of BasesSizePublished
SRR3014933940,000327.5M273.6Mb2024-08-06

ID:
34624552

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